Information for 17-AAAATATT (Motif 7)

G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C G T A C G T C G A T C A G T
p-value:1e-58
log p-value:-1.358e+02
Information Content per bp:1.910
Number of Target Sequences with motif694.0
Percentage of Target Sequences with motif9.88%
Number of Background Sequences with motif2174.4
Percentage of Background Sequences with motif5.09%
Average Position of motif in Targets316.1 +/- 216.6bp
Average Position of motif in Background277.3 +/- 178.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAAATATT------
CTAATATTGCTAAA
 G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAAATATT------
CTAATATTGCTAAA
 G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AAAATATT
-AATTATT
 G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AAAATATT-
AAACAAACATTC
 A C G T A C G T A C G T G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAAATATT
TATGTAAATAT-
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAAATATT
CCAAAAATAG-
 A C G T A C G T A C G T G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAAATATT---
-GAATATTCAT
 G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AAAATATT
DCYAAAAATAGM
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

FOXB1/MA0845.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AAAATATT
TATGTAAATAT-
 A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AAAATATT-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A