Information for 4-TGGAAAAT (Motif 2)

C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T
Reverse Opposite:
C G T A G C A T C G A T C A G T A G C T A G T C A G T C G T C A
p-value:1e-282
log p-value:-6.501e+02
Information Content per bp:1.676
Number of Target Sequences with motif3268.0
Percentage of Target Sequences with motif49.29%
Number of Background Sequences with motif12212.8
Percentage of Background Sequences with motif28.34%
Average Position of motif in Targets311.0 +/- 213.1bp
Average Position of motif in Background280.5 +/- 178.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGGAAAAT
TGGAAAA-
 C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:2
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAAAT
AATGGAAAAT
 A C G T A C G T C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

MA0105.3_NFKB1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGGAAAAT---
GGGAAATTCCC
 C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T A C G T A C G T A C G T
C A T G C T A G C T A G C T G A T G C A C G T A C A G T A G C T G A T C A G T C G T A C

MA0107.1_RELA/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TGGAAAAT---
-GGAAATTCCC
 C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T A C G T A C G T A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGGAAAAT---------
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

MA0101.1_REL/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TGGAAAAT---
-GGAAANCCCC
 C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T A C G T A C G T A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MA0081.1_SPIB/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGGAAAAT
AGAGGAA---
 A C G T A C G T C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGGAAAAT
NCTGGAATGC
 A C G T A C G T C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

MA0136.1_ELF5/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGGAAAAT
AAGGAAGTA
 A C G T C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T
T G C A G T C A A C T G A C T G C T G A G C T A T C A G G A C T C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGGAAAAT
CSTGGGAAAD
 A C G T A C G T C A G T A C T G T C A G T C G A G C T A C G T A C G T A G C A T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A