Information for 5-CTGTGGTT (Motif 3)

A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T
Reverse Opposite:
T C G A C T G A G T A C A G T C C G T A A G T C T C G A T C A G
p-value:1e-244
log p-value:-5.630e+02
Information Content per bp:1.853
Number of Target Sequences with motif2204.0
Percentage of Target Sequences with motif33.24%
Number of Background Sequences with motif7080.8
Percentage of Background Sequences with motif16.43%
Average Position of motif in Targets311.8 +/- 210.8bp
Average Position of motif in Background280.8 +/- 183.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTT-
GCTGTGGTTT
 A C G T A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

MA0002.2_RUNX1/Jaspar

Match Rank:2
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGTT-
GTCTGTGGTTT
 A C G T A C G T A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTT--
CTGTGGTTTN
 A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTT--
NNHTGTGGTTWN
 A C G T A C G T A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTT-
NNTGTGGTTT
 A C G T A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----CTGTGGTT--
GGGGTTTGTGGTTTG
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T A C G T
A C T G C A T G C A T G A C T G A C G T A G C T C A G T A C T G G C A T A C T G A C T G A G C T A G C T C G A T A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTT
GCTGTG---
 A C G T A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTT-
TGCTGTGATTT
 A C G T A C G T A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTGTGGTT
--GTGGAT
 A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

MA0479.1_FOXH1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGTGGTT----
-TGTGGATTNNN
 A G T C A G C T A C T G G C A T A C T G A C T G A G C T A G C T A C G T A C G T A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A