Information for 9-VMCAGCTG (Motif 4)

T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G
Reverse Opposite:
T G A C T G C A C A T G G T A C G A C T T C A G A C G T A T G C
p-value:1e-156
log p-value:-3.599e+02
Information Content per bp:1.667
Number of Target Sequences with motif2579.0
Percentage of Target Sequences with motif38.90%
Number of Background Sequences with motif10385.4
Percentage of Background Sequences with motif24.10%
Average Position of motif in Targets319.8 +/- 224.1bp
Average Position of motif in Background281.1 +/- 183.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:VMCAGCTG---
-HCAGCTGDTN
 T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T A C G T A C G T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-VMCAGCTG-
NNACAGCTGC
 A C G T T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-VMCAGCTG-
CAGCAGCTGN
 A C G T T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VMCAGCTG
AACAGCTG
 T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

MA0500.1_Myog/Jaspar

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:VMCAGCTG---
GACAGCTGCAG
 T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T A C G T A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-VMCAGCTG-
NAACAGCTGT
 A C G T T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

MA0521.1_Tcf12/Jaspar

Match Rank:7
Score:0.95
Offset:0
Orientation:forward strand
Alignment:VMCAGCTG---
AACAGCTGCAG
 T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T A C G T A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--VMCAGCTG--
NNVVCAGCTGBN
 A C G T A C G T T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-VMCAGCTG-
BAACAGCTGT
 A C G T T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.94
Offset:-3
Orientation:reverse strand
Alignment:---VMCAGCTG--
NGNGACAGCTGCN
 A C G T A C G T A C G T T A C G T G C A A G T C C T G A C A T G G T A C A C G T A C T G A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A