Information for 22-ACTTGGCT (Motif 9)

G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T
Reverse Opposite:
C T G A C T A G A G T C A G T C C G T A C G T A A T C G A C G T
p-value:1e-57
log p-value:-1.326e+02
Information Content per bp:1.881
Number of Target Sequences with motif2298.0
Percentage of Target Sequences with motif34.66%
Number of Background Sequences with motif11095.7
Percentage of Background Sequences with motif25.75%
Average Position of motif in Targets324.0 +/- 230.7bp
Average Position of motif in Background281.8 +/- 177.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0161.1_NFIC/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ACTTGGCT
--TTGGCA
 G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGGCT-
NNACTTGCCTT
 A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACTTGGCT-
-CTTGGCAA
 G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGGCT---
TGATTGGCTANN
 A C G T G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T A C G T A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

MA0104.3_Mycn/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTTGGCT
CACGTGGC-
 A C G T G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGGCT
CCGATTGGCT
 A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTTGGCT
GTCACGTGGM-
 A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACTTGGCT--
--TWGTCTGV
 G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T A C G T A C G T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

MA0147.2_Myc/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACTTGGCT
AAGCACATGG--
 A C G T A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

MA0109.1_Hltf/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTTGGCT
AACCTTATAT
 A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A G T C G A C T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T