Information for 13-BTVAATTA (Motif 12)

A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A
Reverse Opposite:
C G A T G T C A G C T A C G A T C G A T A G T C C T G A T C G A
p-value:1e-24
log p-value:-5.662e+01
Information Content per bp:1.652
Number of Target Sequences with motif890.0
Percentage of Target Sequences with motif27.13%
Number of Background Sequences with motif8683.5
Percentage of Background Sequences with motif19.65%
Average Position of motif in Targets101.1 +/- 57.0bp
Average Position of motif in Background99.2 +/- 67.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

UNCX/MA0721.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:BTVAATTA-
-CTAATTAA
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T
A C G T A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A

RAX/MA0718.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:BTVAATTA--
GCCAATTAAC
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T A C G T
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

SHOX/MA0630.1/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:BTVAATTA-
-NCAATTAN
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T
A C G T A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A

HESX1/MA0894.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:BTVAATTA--
NCCAATTANC
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T A C G T
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C

PRRX1/MA0716.1/Jaspar

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:BTVAATTA-
-CTAATTAA
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T
A C G T A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A

Shox2/MA0720.1/Jaspar

Match Rank:6
Score:0.81
Offset:1
Orientation:forward strand
Alignment:BTVAATTA-
-CTAATTAA
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T
A C G T A G T C G A C T G C T A G T C A G C A T C A G T G C T A T C G A

MIXL1/MA0662.1/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:BTVAATTA--
TCTAATTAAC
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T A C G T
C G A T A G T C G A C T T C G A G C T A A G C T A G C T G C T A T C G A T G A C

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-BTVAATTA--
AATTAATTAGT
 A C G T A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

ISX/MA0654.1/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:forward strand
Alignment:BTVAATTA-
-CTAATTAA
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T
A C G T A G T C G A C T G T C A G T C A A C G T A C G T C G T A T C G A

RAX2/MA0717.1/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:forward strand
Alignment:BTVAATTA-
-CCAATTAA
 A G C T A G C T T C A G C G T A G C T A C G A T A C G T C G T A A C G T
A C G T A G T C G A T C T C G A G T C A G A C T A G C T G C T A T C G A