Information for 21-AGCTGCCC (Motif 21)

C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G T G A C G T C A A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.620e+01
Information Content per bp:1.893
Number of Target Sequences with motif316.0
Percentage of Target Sequences with motif9.63%
Number of Background Sequences with motif2867.8
Percentage of Background Sequences with motif6.49%
Average Position of motif in Targets92.3 +/- 57.2bp
Average Position of motif in Background100.8 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGCTGCCC-
DGCAGCTGCYSS
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

ASCL1/MA1100.1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCCC-
NNCCAGCTGCTNN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C A C G T
A T G C T A C G T A G C T A G C T G C A A T C G T A G C G C A T A T C G A G T C G A C T A T C G A T G C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AGCTGCCC---
--CTGCCCGCA
 C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCCC
NNGCAGCTGTC-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCCC--
TGCAGCTGTCCCT
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCCC
AGCAGCTGCT-
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AGCTGCCC---
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCCC-
AGCAGCTGCTNN
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCCC
NNACAGCTGC--
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCCC
NNGCAGCTGTT-
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G G T A C A G T C A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T