Information for 25-ATCCAACCCG (Motif 29)

C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A T C G A C G T A C G T C T A G A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.066e+01
Information Content per bp:1.939
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets116.7 +/- 53.2bp
Average Position of motif in Background96.0 +/- 78.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATCCAACCCG---
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATCCAACCCG-------
-TCGTACCCGCATCATT
 C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCCAACCCG
ATAATCCC-----
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATCCAACCCG----
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

NFYA/MA0060.3/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCCAACCCG-
AACCAATCAGA
 C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATCCAACCCG--
CGTATCGAAACCAAA
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATCCAACCCG
AGCCAATCGG
 C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATCCAACCCG
YCATCMATCA--
 A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATCCAACCCG-----
AACGAAACCGAAACT
 C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATCCAACCCG-
ATAAACCGAAACCAA
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A A T G C G T A C A G T C A C T G A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A