Information for 6-CTCTGGCCAG (Motif 4)

A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
Reverse Opposite:
A T G C G C A T C T A G A T C G T G A C T A G C C G T A T A C G C T G A T A C G
p-value:1e-41
log p-value:-9.458e+01
Information Content per bp:1.623
Number of Target Sequences with motif1167.0
Percentage of Target Sequences with motif35.58%
Number of Background Sequences with motif11029.1
Percentage of Background Sequences with motif24.96%
Average Position of motif in Targets100.6 +/- 54.9bp
Average Position of motif in Background97.9 +/- 71.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTCTGGCCAG---
-TYTGACCASWRG
 A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G A C G T A C G T A C G T
A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCTGGCCAG
WDNCTGGGCA-
 A C G T A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTCTGGCCAG
TCACCTCTGGGCAG
 A C G T A C G T A C G T A C G T A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGGCCAG
GCCTCAGGGCAT
 A C G T A C G T A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCTGGCCAG
SCCTSAGGSCAW
 A C G T A C G T A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGGCCAG
VCCTCTCTGDDY--
 A C G T A C G T A C G T A C G T A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCTGGCCAG
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCTGGCCAG
-TNNGGGCAG
 A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTGGCCAG
GGTCTGGCAT-
 A C G T A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

GFX(?)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTGGCCAG---
-TCTCGCGAGAAT
 A T G C G A C T A T G C G C A T A T C G A C T G T A G C G A T C C G T A T A C G A C G T A C G T A C G T
A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T