Information for 9-GCTGGCAGCC (Motif 7)

C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
Reverse Opposite:
C A T G A T C G T A G C C G A T A C T G A T G C T G A C C G T A A T C G G T A C
p-value:1e-34
log p-value:-8.034e+01
Information Content per bp:1.450
Number of Target Sequences with motif1019.0
Percentage of Target Sequences with motif31.07%
Number of Background Sequences with motif9600.7
Percentage of Background Sequences with motif21.73%
Average Position of motif in Targets100.2 +/- 52.3bp
Average Position of motif in Background99.2 +/- 74.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCAGCC
VGCTGGCA---
 A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCTGGCAGCC-
CTGGCAGNCTGCCA
 A C G T A C G T A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCTGGCAGCC
VGCTGWCAVB-
 A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTGGCAGCC
CTTGGCAA--
 C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCAGCC
NGCTN------
 A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCAGCC--
AGGTGNCAGACAG
 A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCTGGCAGCC
GGTGYTGACAGS-
 A C G T A C G T A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTGGCAGCC
GGTCTGGCAT--
 A C G T A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTGGCAGCC
GCTGTCAA--
 C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCAGCC
GGTTGGCAT--
 A C G T C A T G T A G C G C A T A C T G T A C G T G A C G C T A A T C G T A G C G T A C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T