Information for 21-GCCAAAATAAAC (Motif 11)

A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C
Reverse Opposite:
C T A G A C G T A C G T C A G T C T G A G A C T A G C T G A C T C A G T C A T G C T A G T G A C
p-value:1e-58
log p-value:-1.356e+02
Information Content per bp:1.693
Number of Target Sequences with motif549.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif617.5
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets96.6 +/- 54.7bp
Average Position of motif in Background102.7 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAAATAAAC---
TGCCAAAATAAACANN
 A C G T A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCCAAAATAAAC-
-GCTAARTAAACA
 A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T
A C G T A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAATAAAC-
AGCCGAAAAAAAAAT
 A C G T A C G T A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GCCAAAATAAAC-
----AAATAAACA
 A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCCAAAATAAAC----
----AAACAAACATTC
 A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAATAAAC---
GTTCAAAAAAAAAATTC
 A C G T A C G T A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCAAAATAAAC-
-NCTAAGTAAACA
 A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

ZNF384/MA1125.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCAAAATAAAC
TTTAAAAAAAAA-
 A C G T A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAATAAAC--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCCAAAATAAAC-
---AAAGTAAACA
 A C T G G A T C G T A C G T C A C T G A T C G A C T G A G A C T G T C A T C G A T G C A G A T C A C G T
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A