Information for 22-GTCTAGAC (Motif 12)

A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A C T A G C G T A A G T C
p-value:1e-58
log p-value:-1.346e+02
Information Content per bp:1.949
Number of Target Sequences with motif225.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif148.1
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets94.9 +/- 49.0bp
Average Position of motif in Background110.3 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GTCTAGAC-
CGTCTAGACA
 A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GTCTAGAC-
-TCTAGACA
 A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTCTAGAC--
--BCAGACWA
 A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTCTAGAC------
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCTAGAC--
--CCAGACAG
 A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCTAGAC----
--CCAGACRSVB
 A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCTAGAC-----
NGNTCTAGAACCNGV
 A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCTAGAC------
NNGATCTAGAACCTNNN
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCTAGAC--
NTGTTTAYATWW
 A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCTAGAC
TATTGTTTATT-
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G C G T A A G T C
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T