Information for 5-MAAACCACAG (Motif 3)

G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G
Reverse Opposite:
G A T C G A C T A C T G A G C T A C T G A C T G A G C T G A C T C G A T C A T G
p-value:1e-311
log p-value:-7.168e+02
Information Content per bp:1.717
Number of Target Sequences with motif3548.0
Percentage of Target Sequences with motif24.68%
Number of Background Sequences with motif4556.9
Percentage of Background Sequences with motif13.01%
Average Position of motif in Targets99.8 +/- 53.5bp
Average Position of motif in Background100.6 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:MAAACCACAG
NAAACCACAG
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:MAAACCACAG--
-AAACCACAGAN
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:MAAACCACAG-
-AAACCACAGC
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:MAAACCACAG--
NWAACCACADNN
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:MAAACCACAG-
-AAACCACANN
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.84
Offset:1
Orientation:forward strand
Alignment:MAAACCACAG-
-AAACCGCAAA
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:forward strand
Alignment:MAAACCACAG
-AAACCGCAA
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:MAAACCACAG
--ATCCAC--
 G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--MAAACCACAG
TCCAATCCACA-
 A C G T A C G T G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-MAAACCACAG-
SSAATCCACANN
 A C G T G T A C G C T A C T G A T C G A G T A C A G T C C T G A A G T C C T G A C T A G A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C