Information for 16-TGCCAAGAAAAA (Motif 11)

C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
Reverse Opposite:
A C G T G A C T A C G T A C G T G A C T G A T C G A C T C A G T C T A G T A C G G T A C G C T A
p-value:1e-51
log p-value:-1.195e+02
Information Content per bp:1.693
Number of Target Sequences with motif387.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif551.1
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets99.3 +/- 54.8bp
Average Position of motif in Background100.8 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAAGAAAAA
NNTGCCAAGNN---
 A C G T A C G T C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGCCAAGAAAAA----
TGCCAAAATAAACANN
 C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGAAAAA
GGTGCCAAGT----
 A C G T A C G T C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGCCAAGAAAAA
--CCAATAAAAC
 C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGAAAAA
CGTGCCAAG-----
 A C G T A C G T C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGAAAAA
TTGCCAAG-----
 A C G T C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGCCAAGAAAAA
--CCAATAAAAA
 C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGAAAAA
ATTTCCAAGAA---
 A C G T A C G T C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGCCAAGAAAAA
--CCAATAAAAA
 C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A
A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGAAAAA---
AACCCAATAAAATTCG
 A C G T C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G