Information for 25-CAGACTCAAACY (Motif 16)

G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
Reverse Opposite:
C T A G C A T G C G A T C A G T C G A T A C T G C G T A T C A G G C A T A G T C G A C T C A T G
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.602
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.3 +/- 55.2bp
Average Position of motif in Background132.7 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTCAAACY
BCAGACWA-----
 A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTCAAACY
CCAGACAG-----
 A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGACTCAAACY
CCAGACRSVB---
 A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAGACTCAAACY-
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CAGACTCAAACY
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

IRF4/MA1419.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGACTCAAACY-
CCGAAACCGAAACTA
 A C G T A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGACTCAAACY
TCTAGACA------
 A C G T A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGACTCAAACY
AGCAACAGCCGCACC--
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGACTCAAACY
TCGAAACCGAAACT
 A C G T A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF5/MA1420.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGACTCAAACY
CCGAAACCGAAACT
 A C G T A C G T G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T