Information for 25-CCTCATATGC (Motif 17)

A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.071e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.3 +/- 54.5bp
Average Position of motif in Background54.2 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCTCATATGC
--ACATATGG
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Atoh1/MA0461.2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTCATATGC-
-AACATATGTT
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTCATATGC-
-ACCATATGTT
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTCATATGC-
-NACATATGGN
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTCATATGC-
-GCCATATGGT
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTCATATGC-
-ACCATATGTT
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

Neurog1/MA0623.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTCATATGC-
-ACCATATGGT
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTCATATGC-
-SMCATCTGKH
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T

OLIG2/MA0678.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTCATATGC-
-ACCATATGGT
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTCATATGC-
-AACATATGTC
 A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C G T
A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C