Information for 18-GCCAAGCC (Motif 8)

C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C
Reverse Opposite:
T C A G C T A G A G T C G A C T A C G T T A C G A C T G G T A C
p-value:1e-73
log p-value:-1.699e+02
Information Content per bp:1.609
Number of Target Sequences with motif4203.0
Percentage of Target Sequences with motif37.88%
Number of Background Sequences with motif11327.8
Percentage of Background Sequences with motif29.78%
Average Position of motif in Targets100.4 +/- 56.1bp
Average Position of motif in Background100.8 +/- 64.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAGCC
NNTGCCAAGNN
 A C G T A C G T A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCC
CGTGCCAAG--
 A C G T A C G T A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCC
GGTGCCAAGT-
 A C G T A C G T A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGCC
TTGCCAAG--
 A C G T A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGCC-
TGCCCAGNHW
 A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGCC
ATGCCAACC-
 A C G T A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGCC------
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCAAGCC------
GACCACGCCCTTATT
 A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCCAAGCC----
NNGGCCACGCCTTTN
 A C G T A C G T A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGCC---
GGCCACRCCCMK
 A C G T C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C A C G T A C G T A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G