Information for 14-CGCAGGCTGACC (Motif 15)

A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C T G
p-value:1e-4
log p-value:-9.912e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGGCTGACC-
AGGNCANNGTGACCT
 A C G T A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CGCAGGCTGACC-
-------TGACCT
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGGCTGACC--
GGTCANNGTGACCTN
 A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CGCAGGCTGACC---
-------TGACCYCT
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CGCAGGCTGACC-------
-------TGACCYYTGVYN
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGCAGGCTGACC--
----TGCTGACTCA
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CGCAGGCTGACC---
-------TGACCTYA
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CGCAGGCTGACC-------
-------TGACCTYTGVMC
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGCAGGCTGACC-------
---NNNNTGACCCGGCGCG
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CGCAGGCTGACC-----
-------TGACCTTGAT
 A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T