Information for 6-TGCAACGAGC (Motif 24)

A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.303e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets162.0 +/- 0.0bp
Average Position of motif in Background69.0 +/- 47.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGCAACGAGC
CCGCATAGCAACGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGCAACGAGC--
--GTACGTGCCC
 A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGCAACGAGC
NATGTTGCAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGCAACGAGC-
------CAGCC
 A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TGCAACGAGC
TACCATAGCAACGGT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAACGAGC
NATTGTGCAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCAACGAGC-
-GACACGTGCC
 A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

MYC/MA0147.3/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCAACGAGC--
GGCCACGTGCCC
 A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCAACGAGC
GGGTACGTGC
 A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCAACGAGC--
ATGCAACAGGTGG
 A C G T A C G T A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G