Information for 9-CCTGTGCCAT (Motif 25)

A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.966e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background121.9 +/- 88.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCTGTGCCAT-
-CTGTTCCTGG
 A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGTGCCAT
GCTGTG----
 A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGCCAT-
TGACCTTTGCCCTA
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTGTGCCAT--
---ATGCCAACC
 A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTGTGCCAT--
--GGTGCCAAGT
 A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTGTGCCAT-
--CGTGCCAAG
 A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCTGTGCCAT--
----TGCCAGCB
 A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTGTGCCAT---
TGCCTGCGYCMCCTT
 A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCTGTGCCAT
RTCATGTGAC--
 A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGCCAT--
TGACCTTTGCCCTAN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C