Information for 13-GCCTGCAACT (Motif 28)

A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.833e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background82.3 +/- 73.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCCTGCAACT---
---ACCAACTGTC
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCAACT----
TGCCTGCGYCMCCTT
 A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCAACT-----
NNNCCTGTCACTCANNN
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCTGCAACT--
GSCTGTCACTCA
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCAACT
TTGCGTGCVA--
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCTGCAACT---
ATATGCAAATNNN
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCTGCAACT-
-ACTGAAACCA
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCAACT-
TGTCTGDCACCT
 A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCAACT----
TTGTATGCAAATTAGA
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCAACT----
TTGTATGCAAATTAGA
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A