Information for 3-TTGACCGTGC (Motif 3)

A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C C G T A C G T A
p-value:1e-4
log p-value:-9.912e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCGTGC
NATGACCTTGA
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGACCGTGC
NTGACCTTGA
 A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTGACCGTGC---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGACCGTGC
ATGACCTTGA
 A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCGTGC
BNTGDCCTTG-
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGACCGTGC-
-TGACCTTGAV
 A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

NR2F2/MA1111.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGACCGTGC
NNTGACCTTTN
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCGTGC---
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTGACCGTGC--
GTGACCTTGRVN
 A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGACCGTGC-
-TGACCTTGAN
 A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A