Information for 1-TAGGGGAAAGGT (Motif 4)

A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T C G T A
p-value:1e-4
log p-value:-9.912e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TAGGGGAAAGGT--
TAGGGCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TAGGGGAAAGGT---
ATGTAGGTCAAAGGTCAT
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T T C A G A C G T T C G A C A T G C T A G A C G T A G T C C T G A C T G A C T G A T C A G C A T G A C G T A G T C C T G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TAGGGGAAAGGT--
GTAGGGCAAAGGTCA
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TAGGGGAAAGGT--
TGGGGCAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TAGGGGAAAGGT--
VNAGGKCAAAGGTCA
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TAGGGGAAAGGT
GGAGGGGGAA---
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TAGGGGAAAGGT--
--ANGNAAAGGTCA
 A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAGGGGAAAGGT----
--GGAGAAAGGTGCGA
 A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TAGGGGAAAGGT
TGCGCATAGGGGAGGAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T

ZNF282/MA1154.1/Jaspar

Match Rank:10
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------TAGGGGAAAGGT
NTCGTGTTGTGGGAAAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C G T
T A C G G A C T G T A C T A C G C A G T T A C G C G A T G C A T C T A G C A G T T A C G C T A G A T C G G C T A G C T A C G T A T A C G A C G T A C G T