Information for 3-GCCGTGCCCACA (Motif 6)

A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A C T G A G T C
p-value:1e-4
log p-value:-9.912e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GCCGTGCCCACA
---ATGCCCACC
 A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCGTGCCCACA---
GGGTGTGCCCAAAAGG
 A C G T A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCGTGCCCACA
GCCACRCCCACY
 A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCGTGCCCACA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTGCCCACA
GTGCCGTGTGCAAA
 A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCGTGCCCACA--
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCCGTGCCCACA
---CTGCCCGCA
 A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCGTGCCCACA
GCCMCGCCCMCY
 A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCCGTGCCCACA
---ATGCCAACC
 A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCGTGCCCACA
GCCACGCCCACT
 A C T G A G T C A G T C A C T G A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T