Information for 20-GAGCAGAGTAGA (Motif 19)

A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A G T C A C G T A G T C A C G T A C T G A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets192.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCAGAGTAGA---
GCACAYAGTAGGKCY
 A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGCAGAGTAGA
AAGAGGATTAG-
 A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGCAGAGTAGA
RHHCAGAGAGGB
 A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGCAGAGTAGA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

GATA6/MA1104.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGCAGAGTAGA--
-AAAAGATAAGAAA
 A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C G T
A C G T C G T A C G T A T C G A G C T A T C A G C T G A C G A T C G T A C G T A T A C G T C G A C G T A C G T A

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GAGCAGAGTAGA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAGAGTAGA
GGGAGGACNG----
 A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCAGAGTAGA
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GAGCAGAGTAGA
-NNGAGATAAGA
 A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAGAGTAGA
CGGAGC--------
 A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C T G C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T