Information for 2-RKRAMSCAYGSW (Motif 2)

C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
Reverse Opposite:
C G T A A T G C A G T C C T G A A C G T A C T G A T G C A C G T A C G T A G T C G T A C A G T C
p-value:1e-5
log p-value:-1.226e+01
Information Content per bp:1.761
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1417.9
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets83.0 +/- 40.8bp
Average Position of motif in Background101.4 +/- 72.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RKRAMSCAYGSW-
---TBGCACGCAA
 C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T A C G T
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:RKRAMSCAYGSW
------CACGCA
 C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

JUN::JUNB/MA1132.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RKRAMSCAYGSW
GATGACTCAT---
 A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
C A T G T C G A C A G T A C T G C T G A A T G C C A G T G T A C G C T A G A C T A C G T A C G T A C G T

FOS::JUN/MA0099.3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RKRAMSCAYGSW
NATGACTCAT---
 A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
A C T G T C G A C G A T C A T G C G T A A T G C C A G T G T A C C T G A A G C T A C G T A C G T A C G T

FOSL2::JUN/MA1130.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RKRAMSCAYGSW
NATGACTCATNN-
 A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
C A T G T C G A G A C T A C T G C G T A A T G C C A G T G T A C C G T A A G C T G T A C T G A C A C G T

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--RKRAMSCAYGSW
TGATGACTCATCC-
 A C G T A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
A C G T C A T G T C G A A G C T C A T G C G T A A G T C C A G T G T A C C T G A A G C T G T A C T G A C A C G T

FOSL1::JUND/MA1142.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RKRAMSCAYGSW
GATGACTCAT---
 A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
C T A G T C G A C A G T A C T G C T G A A T G C C A G T G T A C G T C A G A C T A C G T A C G T A C G T

FOS::JUND/MA1141.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RKRAMSCAYGSW
NNATGACTCATNN-
 A C G T A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
A G T C A C T G T C G A A C G T A C T G C G T A A G T C C A G T G T A C C T G A A G C T G T A C T G A C A C G T

FOSL2::JUND/MA1144.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RKRAMSCAYGSW
GATGACTCAT---
 A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
A C T G T C G A A C G T A C T G G T C A A T G C C A G T G T A C C G T A A G C T A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RKRAMSCAYGSW
GGTGACTCATC--
 A C G T C T A G A C T G C T A G C G T A G T C A A T C G A G T C C G T A A G C T A C T G A T C G C G A T
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T