Information for 21-CCTGGTGAGATC (Motif 20)

A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A G T C C G T A A G T C A G T C C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTGAGATC
CCCCCTGCTGTG---
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGGTGAGATC
CCTGCTGAGH--
 A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCTGGTGAGATC
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTGAGATC
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTGAGATC
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGTGAGATC
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTGGTGAGATC
-ATGGGGTGAT-
 A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTGGTGAGATC
-ATGGGGTGAT-
 A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGTGAGATC
CYWSTGGTCARA--
 A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTGGTGAGATC
--AGGTGTGA--
 A G T C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G C G T A A C G T A G T C
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T