Information for 4-GTAAAGTGTA (Motif 22)

A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.635e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background146.3 +/- 78.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGTA
NTCAAGTGG-
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGTA
NTCAAGTGGN
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTAAAGTGTA-
-TTRAGTGSYK
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAAAGTGTA
BTBRAGTGSN
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTAAAGTGTA
-TTAAGTGGN
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTAAAGTGTA
-TTAAGTGC-
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGTA
CTYRAGTGSY
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTAAAGTGTA
-TTAAGTGGT
 A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAAAGTGTA----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PRDM1/MA0508.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTAAAGTGTA
GTGAAAGTGA-
 A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T C G T A
C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A A C G T