Information for 5-CGGACAGTAA (Motif 23)

A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T A C T G A C G T A G T C A G T C A C T G
p-value:1e-3
log p-value:-8.635e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background87.1 +/- 75.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGACAGTAA
GCGGACCBWA-
 A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A
A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGACAGTAA--
--NACAGGAAAT
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGGACAGTAA--
--AACAGGAAGT
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGACAGTAA---
---ACAGGAAGTG
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGACAGTAA-
--GACAATGNN
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PH0073.1_Hoxc9/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGGACAGTAA----
GGAGGTCATTAATTAT
 A C G T A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGACAGTAA
CCAGACAG---
 A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CGGACAGTAA-
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGGACAGTAA-----
ATTTACAGTAGCAAAA
 A C G T A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGACAGTAA
--CACAGN--
 A G T C A C T G A C T G C G T A A G T C C G T A A C T G A C G T C G T A C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T