Information for 6-ATAATATTTC (Motif 24)

C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C G T
p-value:1e-3
log p-value:-8.635e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background117.7 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ATAATATTTC----
CTAATATTGCTAAA
 C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ATAATATTTC----
CTAATATTGCTAAA
 C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATAATATTTC
GKMTCADRTTWC
 A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATAATATTTC
--AATAATT-
 C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATAATATTTC--
NNTAATTATAATTNNN
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATAATATTTC--
NNTAATTATAATNANN
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATAATATTTC--
NANTATTATAATTNNN
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATAATATTTC
GKVTCADRTTWC
 A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ATAATATTTC-
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATAATATTTC
NTAATKGTTT
 C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A G T C
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T