Information for 18-CTCCATTTAC (Motif 27)

A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.249e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets153.0 +/- 0.0bp
Average Position of motif in Background89.6 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCCATTTAC-
-ANCGTTTANN
 A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCCATTTAC
GTCCGCCATTA--
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCCATTTAC-
-NNCAATTANN
 A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C A C G T
A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCCATTTAC
GKMTCADRTTWC
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCCATTTAC
--CCAATTAA
 A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCCATTTAC
--CCAATTAG
 A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCATTTAC
GKVTCADRTTWC
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCCATTTAC
-ACCACTTAA
 A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Msx3/MA0709.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCCATTTAC
--CCAATTAA
 A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCCATTTAC---
NNCATTCATTCATNNN
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T