Information for 2-AGGACGATAT (Motif 3)

C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A G T C A C T G A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0127.1_Gata6_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGACGATAT-------
GCGGCGATATCGCAGCG
 C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGGACGATAT---
--AAGGATATNTN
 C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGACGATAT---
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

ATF7/MA0834.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGACGATAT--
CGATGACGTCATCG
 A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G

OLIG3/MA0827.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGACGATAT---
---ACCATATGTT
 C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

OLIG2/MA0678.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGACGATAT---
---ACCATATGGT
 C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGACGATAT---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGACGATAT-------
NNNCTGATATCTCNNNN
 C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGGACGATAT-
--GACAATGNN
 C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

FOSB::JUN/MA1127.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGACGATAT
GATGACGTCAT
 A C G T C G T A A C T G A C T G C G T A A G T C A C T G C G T A A C G T C G T A A C G T
C T A G T C G A C A G T C A T G C G T A G T A C C T A G G A C T G T A C G C T A G A C T