Information for 4-GATGGGAACCTT (Motif 5)

A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATGGGAACCTT
CCTGGGAAAG--
 A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GATGGGAACCTT
CSTGGGAAAD--
 A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GATGGGAACCTT--
AAGATCGGAANTNNNA
 A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GATGGGAACCTT
TTGCCATGGCAACC--
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GATGGGAACCTT
GGAGGGGGAA---
 A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GATGGGAACCTT-
NAGATWNBNATCTNN
 A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GATGGGAACCTT
GTATTGGGTGGGTAATT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GATGGGAACCTT
TTGCCATGGCAACN--
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATGGGAACCTT--
ACTATGCCAACCTACC
 A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GATGGGAACCTT-
------AAGCTTG
 A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G