Information for 8-CTCAGCCCTCAT (Motif 9)

A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background97.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCCCTCAT
GCTCCGCCCMCY-
 A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCAGCCCTCAT
--CTGCCCGCA-
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCAGCCCTCAT-
---TACCCGCATN
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGCCCTCAT------
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCAGCCCTCAT-
---KGGCCYCWTD
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCAGCCCTCAT----
TCGTACCCGCATCATT
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCAGCCCTCAT
GYCATCMATCAT
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCCCTCAT
NAGCCCCGCCCCCN-
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCAGCCCTCAT
CNGTCACGCCAC--
 A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCAGCCCTCAT
--CAGCC-----
 A G T C A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T