Information for 8-TAGCTCAAGTCC (Motif 10)


Reverse Opposite:

p-value:1e-4
log p-value:-9.602e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets156.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAGCTCAAGTCC-
-AGGTCAAGGTCA

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGCTCAAGTCC---
AAGTTCAAGGTCAGC

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAGCTCAAGTCC-
-AGGTCAAGGTCA

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGCTCAAGTCC-----
-GGCAAAAGTCCAATAA

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAGCTCAAGTCC
---NTCAAGTGG

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAGCTCAAGTCC-
---NTCAAGGTCA

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TAGCTCAAGTCC
TATAAGTAGGTCAA----

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TAGCTCAAGTCC-
---NTCAAGTGGN

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TAGCTCAAGTCC-
---BTCAAGGTCA

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TAGCTCAAGTCC
CAAAGKTCAA----