Information for 14-GTGTCAAGCTCG (Motif 15)


Reverse Opposite:

p-value:1e-4
log p-value:-9.602e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets167.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGTCAAGCTCG
NTGTCAN-----

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAAGCTCG
CCTGTCAA-----

PAX5/MA0014.3/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAAGCTCG
NNGGTCACGCTC-

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAAGCTCG
GCTGTCAA-----

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGTCAAGCTCG
DAGGTGTBAA-----

PBX2/MA1113.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAAGCTCG
NCTGTCAATCAN-

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTGTCAAGCTCG
AGGTGTGAAM----

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGTCAAGCTCG
AAGGTGTGAAA----

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTGTCAAGCTCG----
--GTCACGCTCNCTGA

NFIC/MA0161.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAAGCTCG
NNTGCCAAGNN--