Information for 2-TGTTCTTT (Motif 17)


Reverse Opposite:

p-value:1e-4
log p-value:-9.229e+00
Information Content per bp:1.886
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif1481.4
Percentage of Background Sequences with motif1.43%
Average Position of motif in Targets78.7 +/- 30.1bp
Average Position of motif in Background99.4 +/- 78.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TGTTCTTT---
NTNTTGTTGTTTGTN

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTCTTT--
NCNTTTGTTATTTNN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCTTT-
CTGTTCCTGG

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCTTT
GTGACCTT-

TCF7L1/MA1421.1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGTTCTTT
CCTTTGATCTTT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGTTCTTT----
NNATTGGACTTTNGNN

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGTTCTTT
CCTTTGATCTTT

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTTCTTT----
TGACCTTTNCNT

ZNF384/MA1125.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTTCTTT----
TTTTTTTTTANN

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTTCTTT--------
TGGACTTTGNNCTNTG