Information for 3-GACGGGGGTA (Motif 19)


Reverse Opposite:

p-value:1e-3
log p-value:-8.909e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background190.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACGGGGGTA------
GCTGGGGGGTACCCCTT

GLIS2/MA0736.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GACGGGGGTA
CTTCGCGGGGGGTC

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACGGGGGTA
TATGCGGGTA

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACGGGGGTA----
NTNTGGGGGGTCNNNA

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGGGGTA-
NATNGGGNGGGGANAN

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GACGGGGGTA----
NNNATTGGGGGTNTCCT

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACGGGGGTA--
NTCGGTGGTCGC

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GACGGGGGTA----
ANTNCCGGGGGGAANTT

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GACGGGGGTA-
CATGCGGGTAC

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GACGGGGGTA---
NNNNATGCGGGTNNNN