Information for 22-GTCAGGGATGCA (Motif 26)


Reverse Opposite:

p-value:1e-3
log p-value:-8.909e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background183.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTCAGGGATGCA
-CCWGGAATGY-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCAGGGATGCA
-CCWGGAATGY-

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCAGGGATGCA-
---TGGAATGYRG

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTCAGGGATGCA
---TGGAATGT-

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCAGGGATGCA
-NCTGGAATGC-

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCAGGGATGCA----
-SCAGYCADGCATGAC

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGATGCA---
TATTATGGGATGGATAA

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCAGGGATGCA
--CTGGAATGYA

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGGATGCA
AGTCACGC-----

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GTCAGGGATGCA
GGGGCTYGKCTGGGA----