Information for 23-GTCGTCCTCAGG (Motif 27)


Reverse Opposite:

p-value:1e-3
log p-value:-8.909e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background182.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTCGTCCTCAGG-
-WTGSCCTSAGGS

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GTCGTCCTCAGG----
----GCCTCAGGGCAT

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCGTCCTCAGG---
-NTGCCCANNGGTNA

BATF3/MA0835.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTCGTCCTCAGG
TGATGACGTCATCA--

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCGTCCTCAGG
CAACGTCCGCGG-

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTCGTCCTCAGG
NNANTGGTGGTCTTNNN-

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCGTCCTCAGG---
---GTCCCCAGGGGA

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCGTCCTCAGG----
-NTNGCCTCAGGCNNN

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCGTCCTCAGG--
---AGCCTCAGGCA

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTCGTCCTCAGG
-ACGTCATC---