Information for 24-AAACAAAACTCA (Motif 28)


Reverse Opposite:

p-value:1e-3
log p-value:-8.909e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets155.0 +/- 0.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0037.1_Isgf3g_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAACAAAACTCA
CAAAATCGAAACTAA

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AAACAAAACTCA
ATATCAAAACAAAACA--

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AAACAAAACTCA
GGAAANTGAAACTNA

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAACAAAACTCA
AGAAACGAAAGT--

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAACAAAACTCA
AAAGTAAACAAAAATT-

ZNF384/MA1125.1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AAACAAAACTCA
TTTAAAAAAAAA----

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAACTCA
AAAACAAAGG---

SOX15/MA1152.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAACAAAACTCA
AAAACAATAG---

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACAAAACTCA
GTAAACAAT-----

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAACAAAACTCA
GAAAMTGAAACT--