Information for 5-TCTAGGGCCG (Motif 30)


Reverse Opposite:

p-value:1e-3
log p-value:-8.215e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background95.6 +/- 109.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCTAGGGCCG--
NGNTCTAGAACCNGV

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTAGGGCCG
-CTAGGCCT-

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTAGGGCCG
TGTCTAGA----

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTAGGGCCG-
-TWVGGTCCGC

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCTAGGGCCG---
AAWCTAGGTCARDNN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGGGCCG---
NNGATCTAGAACCTNNN

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTAGGGCCG
NTCAAGGTCA-

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCTAGGGCCG-
AAGTTCAAGGTCAGC

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTAGGGCCG-
-NRRGGGTCTT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTAGGGCCG-----
NNTNAGGGGCGGNNNN