Information for 6-TCTCCACGAA (Motif 31)


Reverse Opposite:

p-value:1e-3
log p-value:-8.215e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets185.0 +/- 0.0bp
Average Position of motif in Background141.7 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCTCCACGAA
-ATCCAC---

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TCTCCACGAA-
NNNCTTTCCAGGAAA

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TCTCCACGAA-
NGCTTTCTAGGAAN

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTCCACGAA
ATTTCCAAGAA

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTCCACGAA----
TCTTTCGAGGAATTTG

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTCCACGAA-
NTTTCCNGGAAA

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCTCCACGAA--
NATTTCCNGGAAAT

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTCCACGAA-
TTTCCTGGAAA

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTCCACGAA-
TTTCCCAGAAN

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TCTCCACGAA-
NTNNCGTATCCAAGTNN