Information for 11-GCGGGTTTGT (Motif 35)


Reverse Opposite:

p-value:1e-3
log p-value:-7.405e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background84.8 +/- 76.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCGGGTTTGT--
GGGGGTGTGTCC

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GCGGGTTTGT
NNNNATGCGGGTNNNN

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGGTTTGT
TATGCGGGTA---

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGTTTGT----
GGNGCGNCTGTTNNN

KLF9/MA1107.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGTTTGT--
NGTGGGTGTGGCN

KLF4/MA0039.3/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGTTTGT
NNAGGGTGTGG

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCGGGTTTGT---
--NNCTTTGTTNN

GRHL2/MA1105.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGTTTGT-
NNAAACTGGTTTGNC

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCGGGTTTGT-
----GTTTGTT

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCGGGTTTGT
CATGCGGGTAC--