Information for 14-AGTATGTCAT (Motif 36)


Reverse Opposite:

p-value:1e-3
log p-value:-7.299e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background89.5 +/- 83.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGTATGTCAT
---NTGTCAN

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:AGTATGTCAT-
-----GTCATN

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGTATGTCAT-
---ACGTCATC

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTATGTCAT
GTTACGTCAT

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AGTATGTCAT--
----TGTCANYT

Crem/MA0609.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTATGTCAT-
-TTACGTCATN

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGTATGTCAT
--TACGTCAT

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGTATGTCAT
TATAAGTAGGTCAA

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTATGTCAT
AAYTAGGTCA-

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTATGTCAT
AAYTAGGTCA-