Information for 17-GTGTATCCTA (Motif 37)


Reverse Opposite:

p-value:1e-3
log p-value:-7.117e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background137.0 +/- 76.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTGTATCCTA
AATGTATCAAT

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTGTATCCTA----
GATAACATCCTAGTAG

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGTATCCTA
CAGCTGTTTCCT-

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTGTATCCTA---
AATAGGGTATCATATAT

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTGTATCCTA---
GATGGGGTATCATTTTT

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGTATCCTA----
NTNNCGTATCCAAGTNN

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGTATCCTA
TGTGGATTNNN

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGTATCCTA---
AATAGGGTATCAATATT

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGTATCCTA---
GATAGGGTATCACTAAT

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTGTATCCTA---
GATAGGGTATCACTAAT