Information for 23-TCCTCGGAGT (Motif 41)


Reverse Opposite:

p-value:1e-2
log p-value:-6.894e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background88.4 +/- 98.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCCTCGGAGT
----CGGAGC

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCGGAGT------
NTNNNAGGAGTCTCNTN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCCTCGGAGT-
RGSMTBCTGGGAAAT

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCCTCGGAGT
TTCCKNAGAA-

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCCTCGGAGT
TCCCCA----

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCCTCGGAGT-
AGTATTCTCGGTTGC

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TCCTCGGAGT-
-GCTCGGSCTC

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------TCCTCGGAGT
GATAACATCCTAGTAG-

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCCTCGGAGT-
NNNATTCCTCGAAAGN

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCCTCGGAGT
NNNTTTCCTGGAAA-