Information for 24-ATGATTCCTT (Motif 42)


Reverse Opposite:

p-value:1e-2
log p-value:-6.894e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background101.5 +/- 87.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATGATTCCTT---
TNNNATGATTTCNNCNN

NFE2/MA0841.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATGATTCCTT
GATGAGTCATN

JDP2/MA0655.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGATTCCTT
ATGAGTCAT-

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATGATTCCTT
CAGCTGTTTCCT-

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATGATTCCTT---
ANNNATGATACCCCATC

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATGATTCCTT---
AATNTTGATACCCTATN

FOSL2::JUNB/MA1138.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGATTCCTT
GATGACTCAT-

FOSL2::JUND/MA1144.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGATTCCTT
GATGACTCAT-

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGATTCCTT-
-GCATTCCAGN

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATGATTCCTT---
ANANNTGATACCCNATN