Information for 4-TAGTAGGAGCAG (Motif 6)


Reverse Opposite:

p-value:1e-4
log p-value:-9.602e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAGTAGGAGCAG
GCACAYAGTAGGKCY--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TAGTAGGAGCAG--
----GGGAGGACNG

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAGTAGGAGCAG
----CGGAGC--

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGTAGGAGCAG--
ADGGYAGYAGCATCT

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TAGTAGGAGCAG------
-NNNNTGAGCACTGTNNG

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TAGTAGGAGCAG-
-RGKGGGCGGAGC

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TAGTAGGAGCAG--
----TGGAACAGMA

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TAGTAGGAGCAG---
-----GGAACAGCCG

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TAGTAGGAGCAG
--CCAGGAACAG

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TAGTAGGAGCAG
--GGAGGGGGAA