Information for 5-CTTTCAGGCAAT (Motif 7)


Reverse Opposite:

p-value:1e-4
log p-value:-9.602e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTTCAGGCAAT
--NACAGGAAAT

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTTTCAGGCAAT
GACCACATTCATACAAT

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTTCAGGCAAT---
TCTTTCGAGGAATTTG

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTCAGGCAAT
-TBGCACGCAA-

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTCAGGCAAT
-TTTCCAGGAAA

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCAGGCAAT-
NCTTCCNGGAAGNN

BCL6B/MA0731.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTTCAGGCAAT---
TGCTTTCTAGGAATTCA

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTTCAGGCAAT
-CTTCTGGGAAA

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTTTCAGGCAAT---
----AAGGCAAGTGT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTTTCAGGCAAT
--NACAGGAAAT